BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028B10LP1|AL428857
(824 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1053 1469 0.0
>3x_Contig1053
Length = 5102
Score = 1469 bits (737), Expect = 0.0
Identities = 761/771 (98%), Gaps = 2/771 (0%)
Strand = Plus / Minus
Query: 54 attwcctggttgtagtttcccacttagtttcacaccattctagaatggtagagctccatg 113
||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2863 attacctggttg-agtttcccact-agtttcacaccattctagaatggtagagctccatg 2806
Query: 114 agtctagtgattcccagaatatagctatcatgttggwatcctcggattcttttaattgtt 173
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2805 agtctagtgattcccagaatatagctatcatgttggaatcctcggattcttttaattgta 2746
Query: 174 atgcagtctcattttgtagcatgtacgcccaaatttcttgctgawattctaggctacaag 233
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 2745 atgcagtctcattttgtagcatgtacgcccaaatttcttgctgaaattctaggctacaag 2686
Query: 234 ctcgttgtatttcagggttttcgaatatcgatattagtwgttcccccgtactttggtcat 293
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2685 ctcgttgtatttcagggttttcgaatatcgatattagtagttcccccgtactttggtcat 2626
Query: 294 aaatcttgccatttttgtttatacaccattttgagagttgcgcgcacgtctgtwatatta 353
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2625 aaatcttgccatttttgtttatacaccattttgagagttgcgcgcacgtctgtaatatta 2566
Query: 354 tggattcccaggtttgcaactgctgctttctgattaatttgttcgtttgaggagtataaa 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2565 tggattcccaggtttgcaactgctgctttctgattaatttgttcgtttgaggagtataaa 2506
Query: 414 gaggtggaaacttgtatatctgtggcgtttctaatgtcattccaatgttgatgaatgttt 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2505 gaggtggaaacttgtatatctgtggcgtttctaatgtcattccaatgttgatgaatgttt 2446
Query: 474 ctgtttctgaatgatgtattctgattgatgatgaaagcgtcagagctggatcaccttttc 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2445 ctgtttctgaatgatgtattctgattgatgatgaaagcgtcagagctggatcaccttttc 2386
Query: 534 tcatataccatgtcgtcgtttcggtacattttttccttggatttcaacttctttcctttc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2385 tcatataccatgtcgtcgtttcggtacattttttccttggatttcaacttctttcctttc 2326
Query: 594 tgataattgthaaahaataaaggattaaacattaaggtataataatgcataaaggaaaaa 653
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2325 tgataattgtaaaaaaataaaggattaaacattaaggtataataatgcataaaggaaaaa 2266
Query: 654 tccagtatattgcaagcacagatgctaggcgatctctcgttcaagctatttttgtgagcc 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2265 tccagtatattgcaagcacagatgctaggcgatctctcgttcaagctatttttgtgagcc 2206
Query: 714 gcttatgaagatttccaaccatcatgcaatcagaggttgatgatttggaacggagatatg 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2205 gcttatgaagatttccaaccatcatgcaatcagaggttgatgatttggaacggagatatg 2146
Query: 774 tctccgtgtataaagagcttctattgcaactggacaagctatttcttttgc 824
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2145 tctccgtgtataaagagcttctattgcaactggacaagctatttcttttgc 2095
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6122
Number of Sequences: 1807
Number of extensions: 6122
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 824
length of database: 10,358,551
effective HSP length: 16
effective length of query: 808
effective length of database: 10,329,639
effective search space: 8346348312
effective search space used: 8346348312
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)